
This high-protein Greek yogurt bagel recipe transforms breakfast with no yeast and just a handful of simple ingredients. You'll have warm, homemade bagels on your table in about 35 minutes that rival any bakery version but with added nutritional benefits.
I discovered this recipe during a snowstorm when we couldn't get to our favorite bagel shop, and it's become our weekend tradition. My children now prefer these homemade versions over store bought ones, often helping to shape and decorate their own bagels with various toppings.
Ingredients
- All purpose flour: Provides the classic bagel structure and can be substituted with whole wheat flour for added fiber and nutrients
- Greek yogurt: Adds remarkable protein content while creating the perfect chewy texture look for thick strained varieties
- Baking powder: Creates the rise without needing yeast allowing these to come together quickly
- Salt: Enhances all the flavors do not skip this ingredient
- Egg: Creates that beautiful golden brown crust when used as a wash
- Optional toppings: Allow for creative variations everything bagel seasoning is our family favorite
Step-by-Step Instructions
- Preheat and Prepare:
- Set your oven to 400°F (200°C) to ensure it reaches proper temperature before baking. Line your baking sheet with parchment paper or a silicone mat to prevent sticking. This step is crucial for easy removal after baking.
- Mix the Dry Ingredients:
- In a large bowl, thoroughly whisk the flour, baking powder, and salt until evenly distributed. For cinnamon bagels, incorporate 2 teaspoons of cinnamon at this stage. Proper mixing ensures even rising and flavor distribution throughout the bagels.
- Add Greek Yogurt:
- Gradually add the Greek yogurt to your dry mixture, initially using a spatula to combine. The dough will look shaggy at first. Once roughly incorporated, use your hands to knead the mixture into a cohesive ball. This process takes about 2 minutes, with the warmth of your hands helping to bring the dough together.
- Shape Your Bagels:
- Lightly dust your work surface with flour to prevent sticking. Divide the dough into 4 equal portions by weight for consistent bagels. Roll each portion into a smooth ball, then flatten slightly. Create the signature hole by either poking through the center with your finger and gently widening, or by rolling the dough into a 7 inch rope and connecting the ends with a slight overlap, pressing to seal.
- Apply Egg Wash and Toppings:
- Beat one egg in a small bowl until smooth. Using a pastry brush, carefully coat each bagel with a thin layer of egg wash, ensuring full coverage for that golden finish. Immediately sprinkle your chosen toppings while the egg wash is still wet to ensure they adhere during baking.
- Bake to Perfection:
- Place the bagels on your prepared baking sheet, leaving at least 2 inches between each. Bake for 22–25 minutes until the tops are golden brown and the bagels feel firm to the touch. For even browning, rotate the baking sheet halfway through the baking time.

The Greek yogurt is truly the magic ingredient in this recipe. I was skeptical at first about whether it could really create that authentic bagel chew, but the protein in the yogurt creates amazing structure. My daughter now requests these for her birthday breakfast instead of pancakes a true testament to how special they are.
Storage Solutions
These homemade bagels maintain their freshness differently depending on your storage method. At room temperature, store them in an airtight container or bag for up to 2 days. For longer storage, refrigerate for up to one week, though I recommend toasting them when serving from the refrigerator to restore their texture. For meal prep, freeze completely cooled bagels in a freezer safe bag for up to two months. Thaw overnight in the refrigerator or toast directly from frozen for the best results.
Creative Flavor Variations
The beauty of this base recipe lies in its versatility. For sweet variations, mix cinnamon and a tablespoon of honey into the dough, then top with a cinnamon sugar mixture. Savory lovers can fold in 1/4 cup of shredded cheese and herbs like rosemary or thyme directly into the dough. For a healthier twist, incorporate 2 tablespoons of ground flaxseed or chia seeds into the dry ingredients. My personal favorite is adding roasted garlic cloves into the dough and topping with asiago cheese before baking.
Perfect Pairings
These protein packed bagels make an excellent canvas for numerous toppings. For breakfast, slice and toast them before spreading with cream cheese, avocado, or nut butter. Create a hearty lunch sandwich with turkey, lettuce, and tomato on an everything bagel. For a special brunch, serve them alongside scrambled eggs and fresh fruit. The whole wheat version pairs beautifully with smoked salmon, capers, and a light spread of cream cheese for an elevated weekend breakfast.

These bagels deliver both nutrition and indulgence in every bite—perfect for any time of day!
Frequently Asked Questions
- → Can I use whole wheat flour instead of all-purpose flour?
Yes, whole wheat flour works as a direct 1:1 substitution in this recipe. The bagels will have a slightly denser texture and nuttier flavor, but still maintain their chewy quality.
- → Why is my dough too sticky?
If your dough feels too sticky, it's likely because different brands of Greek yogurt have varying moisture levels. Simply add additional flour, one tablespoon at a time, until the dough reaches a workable consistency.
- → Can I make these bagels dairy-free?
While traditional Greek yogurt is essential for the texture and protein content, you can experiment with thick dairy-free Greek-style yogurt alternatives. Results may vary slightly in texture and rise.
- → What's the best way to store these bagels?
Store the bagels in an airtight container at room temperature for up to 2 days, in the refrigerator for up to 1 week, or freeze them for up to 2 months. To refresh, toast from frozen or warm slightly in the oven.
- → How can I add more flavor to these bagels?
Beyond the suggested toppings, you can incorporate mix-ins directly into the dough such as herbs, garlic powder, or cinnamon. Just add dry seasonings with the flour, or fold in solid ingredients like cheese or chocolate chips after forming the dough.
- → Do I need to boil these bagels before baking?
Unlike traditional bagels, this quick version doesn't require boiling. The Greek yogurt helps create that characteristic chewiness without the extra step, making these much faster to prepare.